Chapter 4: Brain Systems & Neural Pathways

Explore the complex architecture of the brain through interactive 3D models

How do brain systems organize and develop?

The human brain is a marvel of biological engineering, containing specialized systems that work in harmony to enable perception, movement, cognition, and consciousness. From the Circle of Willis that ensures blood supply to every neuron, to the precise developmental timeline that builds this complexity from a single cell, understanding brain systems reveals the elegant architecture underlying all human experience.

In this exploration, you'll discover:

Start by selecting a tab below to begin your exploration!

Interactive 3D Brain Model

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Major Brain Regions

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Brain Region Explorer

Click on any region below to explore detailed information

Frontal Lobe

Executive functions, planning

Parietal Lobe

Sensory processing, space

Temporal Lobe

Memory, hearing, language

Occipital Lobe

Visual processing

Cerebellum

Balance, coordination

Brainstem

Vital functions, consciousness

Thalamus

Sensory relay station

Corpus Callosum

Inter-hemispheric bridge

Explore Cortical Systems

๐Ÿƒโ€โ™‚๏ธ

Motor System

Voluntary movement and motor control

๐ŸŽฏ Primary Motor Cortex (M1)

Location: Precentral gyrus (BA 4)

Controls voluntary muscle movements with precise somatotopic organization (motor homunculus). Direct corticospinal projections to spinal motor neurons.

๐Ÿ”ง Premotor Cortex (PM)

Location: BA 6

Plans and prepares movements. Includes supplementary motor area (SMA) for complex movement sequences.

โš•๏ธ Clinical Disorders

  • โ€ข Hemiplegia: M1 stroke โ†’ contralateral paralysis
  • โ€ข Apraxia: Premotor damage โ†’ movement planning deficits
  • โ€ข Spasticity: Upper motor neuron lesions

๐Ÿงช Motor Plasticity

Motor cortex can reorganize after injury through activity-dependent plasticity, enabling recovery of function.

๐Ÿ‘‹

Somatosensory System

Touch, pressure, temperature, and proprioception

๐Ÿ–๏ธ Primary Somatosensory (S1)

Location: Postcentral gyrus (BA 1, 2, 3)

Processes tactile information with somatotopic organization (sensory homunculus). BA 3a/3b process touch, BA 1 texture, BA 2 proprioception.

๐Ÿง  Secondary Somatosensory (S2)

Location: Parietal operculum

Integrates bilateral sensory information and processes complex tactile patterns and textures.

โš•๏ธ Clinical Disorders

  • โ€ข Tactile agnosia: Cannot recognize objects by touch
  • โ€ข Neglect syndrome: Ignore contralateral space
  • โ€ข Phantom limb: Sensations in amputated limbs

๐Ÿ“Š Sensory Pathways

Dorsal column-medial lemniscal (fine touch) and spinothalamic (pain/temperature) pathways converge in S1.

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Visual System

Vision processing and visual perception

๐Ÿ‘๏ธ Primary Visual Cortex (V1)

Location: Calcarine cortex (BA 17)

Processes basic visual features: orientation, spatial frequency, disparity. Retinotopic organization with ocular dominance columns.

๐Ÿ” Visual Association Areas

Location: V2, V3, V4, V5/MT

Process complex visual features: color (V4), motion (V5/MT), form and depth (V2/V3).

โš•๏ธ Clinical Disorders

  • โ€ข Cortical blindness: V1 lesions โ†’ blindness with intact pupils
  • โ€ข Achromatopsia: V4 lesion โ†’ color blindness
  • โ€ข Akinetopsia: V5/MT lesion โ†’ motion blindness

๐Ÿ›ค๏ธ Visual Streams

Dorsal: "Where/How" pathway to parietal cortex
Ventral: "What" pathway to temporal cortex

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Auditory System

Hearing and sound processing

๐Ÿ‘‚ Primary Auditory Cortex (A1)

Location: Heschl's gyrus (BA 41, 42)

Tonotopic organization processing frequency, intensity, and binaural information for sound localization.

๐ŸŽต Secondary Auditory Areas

Location: Superior temporal gyrus

Process complex sounds: music, speech patterns, and auditory object recognition.

โš•๏ธ Clinical Disorders

  • โ€ข Cortical deafness: Bilateral A1 lesions
  • โ€ข Auditory agnosia: Cannot recognize sounds
  • โ€ข Tinnitus: Phantom auditory sensations

๐Ÿ”Š Auditory Streams

Dorsal: "Where" pathway for spatial processing
Ventral: "What" pathway for sound identification

๐Ÿ’ฌ

Language System

Speech production and comprehension

๐Ÿ—ฃ๏ธ Broca's Area

Location: Left inferior frontal gyrus (BA 44, 45)

Speech production, grammar processing, and motor aspects of language. Connected to motor cortex via arcuate fasciculus.

๐Ÿ‘‚ Wernicke's Area

Location: Left superior temporal gyrus (BA 22)

Language comprehension, semantic processing, and auditory word recognition.

โš•๏ธ Language Disorders

  • โ€ข Broca's aphasia: Non-fluent, telegraphic speech
  • โ€ข Wernicke's aphasia: Fluent but meaningless speech
  • โ€ข Conduction aphasia: Arcuate fasciculus damage

๐Ÿ”— Language Networks

Dorsal stream (syntax/phonology) and ventral stream (semantics) connect language areas.

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Executive System

Planning, decision-making, and cognitive control

๐ŸŽฏ Prefrontal Cortex (PFC)

Location: Frontal lobe (BA 9, 10, 11, 46, 47)

Executive control, working memory, planning, decision-making, and personality expression.

โš–๏ธ Anterior Cingulate Cortex

Location: Medial frontal cortex (BA 24, 32)

Conflict monitoring, error detection, and emotion regulation.

๐Ÿ”ง Executive Functions

  • โ€ข Working memory: Temporary information storage
  • โ€ข Cognitive flexibility: Task switching
  • โ€ข Inhibitory control: Impulse suppression

โš•๏ธ Executive Disorders

  • โ€ข Dysexecutive syndrome: PFC damage
  • โ€ข ADHD: Attention and impulse control deficits
  • โ€ข Schizophrenia: Working memory impairments
๐Ÿ”—

Association Areas

Integration and higher-order processing

๐Ÿงฉ Parietal Association

Spatial processing, attention, body schema (BA 5, 7, 39, 40)

๐ŸŽญ Temporal Association

Object recognition, semantic memory (BA 20, 21, 37, 38)

๐ŸŒŸ Frontal Association

Executive functions, planning, personality (BA 9, 10, 11)

๐Ÿงฉ

Memory System

Learning, storage, and recall

๐ŸŒŠ Hippocampus

Declarative memory formation, spatial navigation, temporal sequences

๐Ÿ’ญ Cortical Memory Areas

Long-term storage in neocortical areas, working memory in PFC

โค๏ธ

Emotional System

Emotion processing and regulation

๐Ÿง  Limbic Cortex

Anterior cingulate, orbitofrontal cortex - emotion regulation

โšก Amygdala Connections

Fear processing, emotional memory, social cognition

๐ŸŽฏ

Attention System

Focus, alertness, and awareness

๐Ÿ” Dorsal Network

Top-down attention control (frontal & parietal cortex)

โšก Ventral Network

Bottom-up attention capture (temporal & frontal cortex)

๐ŸŒŸ Salience Network

Switches between networks (anterior insula & ACC)

Circle of Willis - Interactive Blood Supply

ACA MCA MCA PCA VA VA BA ๐Ÿ–ฑ๏ธ Click vessels to explore

Vessel Information

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Cerebral Circulation

Click on any vessel to explore detailed anatomical and clinical information

Quick Actions

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Instructions

Click vessels to learn about them, use controls to animate flow or simulate strokes

Brain Development Timeline

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Conception (Day 0)

The journey begins with fertilization when sperm and egg unite to form a zygote. This single cell contains all genetic information needed to build a complete nervous system.

๐Ÿ”ฌ Key Events
  • Sperm-egg fusion occurs
  • Zygote formation completed
  • First mitotic division begins
โš•๏ธ Clinical
  • Folic acid prevents neural defects
  • Maternal health affects development
  • Genetic counseling relevance

Brain Imaging & Anatomical Planes

Understanding brain anatomy requires knowledge of different imaging planes and how they reveal brain structures. This is essential for interpreting clinical findings and localizing pathology.

ANTERIOR
POSTERIOR
R
L

Looking down from above (bird's eye view)

๐Ÿ“‹ Axial Plane Details

Also Known As:

โ€ข Transverse plane
โ€ข Horizontal plane

Divides Brain Into:

โ€ข Superior (upper) portions
โ€ข Inferior (lower) portions

Clinical Use:

Most common for CT scans. Essential for stroke localization and measuring brain structures.

Hemorrhage Example:

"Right frontal hemorrhage at the level of the lateral ventricles"

๐Ÿงญ Coordinate System

Anterior (A): Front
Posterior (P): Back
Superior (S): Top
Inferior (I): Bottom
Left (L): Patient's left
Right (R): Patient's right

๐Ÿšจ Clinical Examples

Stroke Localization:

"Left MCA infarct extending from corona radiata to cortex"

Tumor Description:

"Right frontal mass with midline shift"

Hemorrhage Location:

"Subarachnoid hemorrhage in basal cisterns"